I think you need to take your jets out and check what they are ?
Then get it all back to standard jetting with the needle on the right slot and the pilot screw set to default (2.5 turns I think - please check).
Then as long as your filter is clean, you should have a good base to start with.
Also it could be that its running really rich on the pilot screw/jet so it will only run at full throttle (lots of air getting in).
Personally I think its your pilot circuit or perhaps the vacumn could be sticking open. Did you check the diaphram and that the plunger falls again ??
Your valves and compression seem to be ok if it fulls full strengh at full throttle.
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Did some trips.
Rode some bikes.
Fix them for a living.
Can't say anymore.
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